Protein ZmHB73 | |
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Information | |
TF Name: | ZmHB73 |
Species: | Maize |
TF Family: | Homeobox |
Gene Name(Synonym): | HB73 |
Uniprot ID: | K7U018 |
Subgenome: | 1 |
ZmHB73 is a protein in the Homeobox family.
Overview of domains present in v5 transcripts | ||
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PF00046 | WUS-HB | |
Zm00001eb414580_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d024410 | DAPseq | sequence | fimo | position | |
Zm00001d024410 | DAPseq | sequence | fimo | position | |
Zm00001d024410 | ChIPseq | sequence | fimo | position | |
Zm00001d024410 | PChIPseq | sequence | fimo | position |
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00046 |
|
WUS-HB |
|
Hover here to show all domains |
AATTATGCCTCCACTCCATTAGGTT...
AATTATGCCTCCACTCCATTAGGTTCGCCCTGTGTCGGTCATCCCTCTCCCCTTCTCTTCTATTCCTGCGTCCCTTTCCACAACGCTGTCTCGTTCTCTAGCTCACTAGCTTTGACCGTTTTCCAGGCTCTAGCCACCCCTGTGTCCCCCAGCGATCCCCCACCATGGGCTCCCACTCCCACCTCGGCCAAGCACTACAAGCCCACCACCACCACCACCACCACCACCGCGGCGGCGAGTGCGAGCCAGCGACGGCGGCGGCGGCGAGGTCGCGGTGGGCGCCCAAGCCGGAGCAGATCCTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTGCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGGTCCCGGTCGCGGCGCCGCGCCCGCCAGCTGCAGCAGCAGCAGGCCGGCTCGGGCCCGCAGCACCCAACCGCCGCCGCAGCCGCCGGCCACGTCCACGGCGCCAACGCCAACGACGGCGTGTCACTCTACGCCATGCACGGGCACGCTGGCCAGCAGCAGCAGGCGCGCGCCGCCGGCCTGCCCGCGGTCGCGCCGGTGGTGCTGCCGCCTGCCGCCGTCGCGTCGTCGCCCCGCTTCTTCGGCGACGAAATCGATACTGACGGCGGGGACGACCTCTTCGCCATCTCCCGGCAAATGGGGCTCATGTCGCGCGGCGGCGAGCAGCATGGTTGCGGCTACGTGGCTAACAACGACGCCTCCCAGTCCCACCTGCTGAGCTACCAACCAACTGGGACGGCGACGACGGCGGCGGCGGCGTATATCCAGGTGTCCATCAACGGCGTGGTGTACGAGGTGCCAGGCGCCGGGGCATTGCTGGACTTGGCAGGCACGTTCGGGCGCGATGCGATGCTGGTCCACTCCTCCGGCGAGATCCTACCGGTGAACGAGAACGGCGTCCTCATGAAGAGCTTGCAGATGGGGGAATGCTACTACCTGGTTTCGAAATCTACTTAATAACCAGCTGCTGCTTGTTGCCTGCTGCTGCGTATTATGATGATTTGAGTAATGTGCTAGTAAGAAGCATGTAACGACAATTGATGAGTAGATTGTTAAGTCGTCCATATGTTATACTATCTTAGTTCTCGAATATTTATCGCTTGCTAGTTTAACTTTCGAACTAAAACAACGCGACAGGAAGGAGTATCAGTATGTACTAATGTGTTGTTC
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVSKST
AATTATGCCTCCACTCCATTAGGTT...
AATTATGCCTCCACTCCATTAGGTTCGCCCTGTGTCGGTCATCCCTCTCCCCTTCTCTTCTATTCCTGCGTCCCTTTCCACAACGCTGTCTCGTTCTCTAGCTCACTAGCTTTGACCGTTTTCCAGGCTCTAGCCACCCCTGTGTCCCCCAGCGATCCCCCACCATGGGCTCCCACTCCCACCTCGGCCAAGCACTACAAGCCCACCACCACCACCACCACCACCACCGCGGCGGCGAGTGCGAGCCAGCGACGGCGGCGGCGGCGAGGTCGCGGTGGGCGCCCAAGCCGGAGCAGATCCTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTGCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGGTCCCGGTCGCGGCGCCGCGCCCGCCAGCTGCAGCAGCAGCAGGCCGGCTCGGGCCCGCAGCACCCAACCGCCGCCGCAGCCGCCGGCCACGTCCACGGCGCCAACGCCAACGACGGCGTGTCACTCTACGCCATGCACGGGCACGCTGGCCAGCAGCAGCAGGCGCGCGCCGCCGGCCTGCCCGCGGTCGCGCCGGTGGTGCTGCCGCCTGCCGCCGTCGCGTCGTCGCCCCGCTTCTTCGGCGACGAAATCGATACTGACGGCGGGGACGACCTCTTCGCCATCTCCCGGCAAATGGGGCTCATGTCGCGCGGCGGCGAGCAGCATGGTTGCGGCTACGTGGCTAACAACGACGCCTCCCAGTCCCACCTGCTGAGCTACCAACCAACTGGGACGGCGACGACGGCGGCGGCGGCGTATATCCAGGTGTCCATCAACGGCGTGGTGTACGAGGTGCCAGGCGCCGGGGCATTGCTGGACTTGGCAGGCACGTTCGGGCGCGATGCGATGCTGGTCCACTCCTCCGGCGAGATCCTACCGGTGAACGAGAACGGCGTCCTCATGAAGAGCTTGCAGATGGGGGAATGCTACTACCTGGTTTCGAAATCTACTTAATAACCAGCTGCTGCTTGTTGCCTGCTGCTGCGTATTATGATGATTTGAGTAATGTGCTAGTAAGAAGCATGTAACGACAATTGATGAGTAGATTGTTAAGTCGTCCATATGTTATACTATCTTAGTTCTCGAATA
MGSHSHLGQALQAHHHHHHHHRGGECEPATAAAARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDA
NVFYWFQNRRSRSRRRARQLQQQQAGSGPQHPTAAAAAGHVHGANANDGVSLYAMHGHAGQQQQARAAGLPAVAPVVLPP
AAVASSPRFFGDEIDTDGGDDLFAISRQMGLMSRGGEQHGCGYVANNDASQSHLLSYQPTGTATTAAAAYIQVSINGVVY
EVPGAGALLDLAGTFGRDAMLVHSSGEILPVNENGVLMKSLQMGECYYLVGHQL
AATTATGCCTCCACTCCATTAGGTT...
AATTATGCCTCCACTCCATTAGGTTCGCCCTGTGTCGGTCATCCCTCTCCCCTTCTCTTCTATTCCTGCGTCCCTTTCCACAACGCTGTCTCGTTCTCTAGCTCACTAGCTTTGACCGTTTTCCAGGCTCTAGCCACCCCTGTGTCCCCCAGCGATCCCCCACCATGGGCTCCCACTCCCACCTCGGCCAAGCACTACAAGCCCACCACCACCACCACCACCACCACCGCGGCGGCGAGTGCGAGCCAGCGACGGCGGCGGCGGCGAGGTCGCGGTGGGCGCCCAAGCCGGAGCAGATCCTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTGCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGGTCCCGGTCGCGGCGCCGCGCCCGCCAGCTGCAGCAGCAGCAGGCCGGCTCGGGCCCGCAGCACCCAACCGCCGCCGCAGCCGCCGGCCACGTCCACGGCGCCAACGCCAACGACGGCGTGTCACTCTACGCCATGCACGGGCACGCTGGCCAGCAGCAGCAGGCGCGCGCCGCCGGCCTGCCCGCGGTCGCGCCGGTGGTGCTGCCGCCTGCCGCCGTCGCGTCGTCGCCCCGCTTCTTCGGCGACGAAATCGATACTGACGGCGGGGACGACCTCTTCGCCATCTCCCGGCAAATGGGGCTCATGTCGCGCGGCGGCGAGCAGCATGGTTGCGGCTACGTGGCTAACAACGACGCCTCCCAGTCCCACCTGCTGAGCTACCAACCAACTGGGACGGCGACGACGGCGGCGGCGGCGTATATCCAGGTGTCCATCAACGGCGTGGTGTACGAGGTGCCAGGCGCCGGGGCATTGCTGGACTTGGCAGGCACGTTCGGGCGCGATGCGATGCTGGTCCACTCCTCCGGCGAGATCCTACCGGTGAACGAGAACGGCGTCCTCATGAAGAGCTTGCAGATGGGGGAATGCTACTACCTGGTAGGCCATCAGCTGTGA
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